H12O. EXPERIMENTAL ONCOLOGY LABORATORY AT MEDICAL ONCOLOGY DPT:

Our resources include:

  • New laboratory facilities at the Experimental Oncology Center for sample processing and fully equipped cell culture room.
  • Access to patient clinical data for annotation and follow-up of the clinical information
  • Service of analytical extractions for collection of blood samples
  • Laminar flow hood for processing biological samples.
  • Sample cryopreservation facilities (freezer -80, liquid nitrogen tank).
  • Qiagen QIAcube for automated DNA/RNA extraction.
  • Covaris® M220 for cfDNA extraction from Plasma, DNA/RNA/Protein extraction from FFPE.
  • QubitTM 4 Fluorometer for DNA/RNA quantification
  • Ion Torrent Genexus System à next-generation sequencing (NGS) platform that automates the main steps in the NGS workflow, including sample purification and quantification, library preparation, sequencing, bioinformatics analysis, and reporting.
  • Agilen 2100 Bioanalyzer and Solexa/Illumina SBS technology for RNA sequencing
  • TAPE Station 4150 for RNA quantification and quality control
  • GeoMx® Digital Spatial Profilerà spatial multiomic platform for analysis of FFPE and fresh frozen tissue sections
  • CosMx™ SMIàhigh-plex in situ analysis platform to provide spatial multiomics with formalin-fixed paraffin-embedded (FFPE) and fresh frozen (FF) tissue samples at cellular and subcellular resolution
  • nCounter™ Analysis System (nanoString)à nCounter PrepStation + nCounter Digital Analyzer
  • In addition : DNBSEQ-G400 DNA Sequencer (MGI Tech)

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